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	<title>Mailund on the Internet &#187; Uncategorized</title>
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	<link>http://www.mailund.dk</link>
	<description>Computer science, bioinformatics, genetics, and everything in between</description>
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		<title>Is it time to get back to blogging?</title>
		<link>http://www.mailund.dk/index.php/2011/01/11/is-it-time-to-get-back-to-blogging/</link>
		<comments>http://www.mailund.dk/index.php/2011/01/11/is-it-time-to-get-back-to-blogging/#comments</comments>
		<pubDate>Tue, 11 Jan 2011 09:00:10 +0000</pubDate>
		<dc:creator>Thomas Mailund</dc:creator>
				<category><![CDATA[Uncategorized]]></category>
		<category><![CDATA[blogging]]></category>

		<guid isPermaLink="false">http://www.mailund.dk/index.php/2011/01/11/is-it-time-to-get-back-to-blogging/</guid>
		<description><![CDATA[With the whole RSI stuff, I&#8217;ve been away from the blog since August. So long, really, that I hardly think about blogging any more. So I figure that if I don&#8217;t get started again soon, I probably never will. So here&#8217;s the first post in a long while. It&#8217;s also the first post I&#8217;ve written [...]]]></description>
			<content:encoded><![CDATA[<p>With the whole RSI stuff, I&#8217;ve been away from the blog since August. So long, really, that I hardly think about blogging any more. So I figure that if I don&#8217;t get started again soon, I probably never will. So here&#8217;s the first post in a long while.</p>
<p>It&#8217;s also the first post I&#8217;ve written on an iPad, so let&#8217;s see how that goes.</p>
<p>So much has happened while I&#8217;ve been away from the blog that I would have loved to write about, but by now it would just seem silly to rehash old news. But I am sure that there will soon be interesting news to write about.</p>
<p>I expect a slow start now that I try to get back. I&#8217;m still in physiotherapy and far from recovered, so I have to keep my computer time pretty short, but let&#8217;s see how it goes.</p>
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		<slash:comments>6</slash:comments>
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		<item>
		<title>The world as we know it</title>
		<link>http://www.mailund.dk/index.php/2010/01/03/the-world-as-we-know-it/</link>
		<comments>http://www.mailund.dk/index.php/2010/01/03/the-world-as-we-know-it/#comments</comments>
		<pubDate>Sun, 03 Jan 2010 10:38:03 +0000</pubDate>
		<dc:creator>Thomas Mailund</dc:creator>
				<category><![CDATA[Uncategorized]]></category>

		<guid isPermaLink="false">http://www.mailund.dk/?p=2029</guid>
		<description><![CDATA[]]></description>
			<content:encoded><![CDATA[<p style="text-align: center;"><iframe title="YouTube video player" class="youtube-player" type="text/html" width="425" height="344" src="http://www.youtube.com/embed/17jymDn0W6U" frameborder="0" allowFullScreen></iframe></p>
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		<slash:comments>1</slash:comments>
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		<item>
		<title>Down with the flu</title>
		<link>http://www.mailund.dk/index.php/2009/11/29/down-with-the-flu/</link>
		<comments>http://www.mailund.dk/index.php/2009/11/29/down-with-the-flu/#comments</comments>
		<pubDate>Sun, 29 Nov 2009 11:52:48 +0000</pubDate>
		<dc:creator>Thomas Mailund</dc:creator>
				<category><![CDATA[Uncategorized]]></category>

		<guid isPermaLink="false">http://www.mailund.dk/?p=1970</guid>
		<description><![CDATA[I&#8217;ve been down with the flu all week. It seems to be very popular these days.  A lot of people get the flu around here.  Personally, I don&#8217;t really see the attraction &#8212; I didn&#8217;t enjoy it one bit. Anyway, I&#8217;m finally mostly recovered, so I&#8217;m up and about again, and getting ready to go [...]]]></description>
			<content:encoded><![CDATA[<p>I&#8217;ve been down with the flu all week.</p>
<p>It seems to be very popular these days.  A lot of people get the flu around here.  Personally, I don&#8217;t really see the attraction &#8212; I didn&#8217;t enjoy it one bit.</p>
<p>Anyway, I&#8217;m finally mostly recovered, so I&#8217;m up and about again, and getting ready to go to Hinxton for a meeting in the Gorilla Genome Consortium tomorrow.  I&#8217;m pretty happy that I recovered just in time, &#8217;cause this is a meeting I&#8217;ve been looking forward to.</p>
<p>&#8211;</p>
<p>333-328=+5</p>
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		<slash:comments>0</slash:comments>
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		<item>
		<title>Happy 9-11</title>
		<link>http://www.mailund.dk/index.php/2009/11/09/happy-9-11/</link>
		<comments>http://www.mailund.dk/index.php/2009/11/09/happy-9-11/#comments</comments>
		<pubDate>Mon, 09 Nov 2009 07:28:32 +0000</pubDate>
		<dc:creator>Thomas Mailund</dc:creator>
				<category><![CDATA[Uncategorized]]></category>

		<guid isPermaLink="false">http://www.mailund.dk/?p=1952</guid>
		<description><![CDATA[That&#8217;s Nov 9, not Sep 11, for you guys out there who use the weird month/day/year notation&#8230; There is nothing to celebrate Sep 11, but Nov 9 is a day for celebration, and today we celebrate the 20 year anniversary of the fall of the Berlin Wall which is as good a date as any [...]]]></description>
			<content:encoded><![CDATA[<p><a href="http://www.mailund.dk/wp-content/uploads/2009/11/800px-Berlin_Wall.JPG"><img class="alignright size-medium wp-image-1953" title="800px-Berlin_Wall" src="http://www.mailund.dk/wp-content/uploads/2009/11/800px-Berlin_Wall-300x224.jpg" alt="800px-Berlin_Wall" width="201" height="151" /></a>That&#8217;s Nov 9, not Sep 11, for you guys out there who use the weird month/day/year notation&#8230;</p>
<p>There is nothing to celebrate Sep 11, but Nov 9 <em>is</em> a day for celebration, and today we celebrate the 20 year anniversary of the fall of the <a href="http://en.wikipedia.org/wiki/Berlin_Wall">Berlin Wall</a> which is as good a date as any for celebrating the end of the <a href="http://en.wikipedia.org/wiki/Cold_War">Cold War</a>.</p>
<p>I was in Berlin a few weeks after the fall of the wall myself. That was on a trip that was planned before the fall of the wall, so it was pure luck that I experienced this historical event first hand.</p>
<p style="text-align: center;"><iframe title="YouTube video player" class="youtube-player" type="text/html" width="425" height="344" src="http://www.youtube.com/embed/WjWDrTXMgF8" frameborder="0" allowFullScreen></iframe></p>
<p style="text-align: left;">It is hard today to imagine how east and west Europe was separated and practically two different worlds. Today, I have many friends from eastern Europe and the former USSR; that would not have been possible 20 years ago.  We have students here at BiRC and at AU in general from the other side of the iron curtain.  That would not have been possible 20 years ago.</p>
<p style="text-align: left;">Today is truly a day for celebration!</p>
<p style="text-align: left;">&#8211;</p>
<p style="text-align: left;">313-323=-10</p>
<p style="text-align: left;">
<p style="text-align: left;">
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		<item>
		<title>Interview with Svante Paabo</title>
		<link>http://www.mailund.dk/index.php/2009/10/27/interview-with-svante-paabo/</link>
		<comments>http://www.mailund.dk/index.php/2009/10/27/interview-with-svante-paabo/#comments</comments>
		<pubDate>Tue, 27 Oct 2009 06:16:52 +0000</pubDate>
		<dc:creator>Thomas Mailund</dc:creator>
				<category><![CDATA[Uncategorized]]></category>

		<guid isPermaLink="false">http://www.mailund.dk/?p=1939</guid>
		<description><![CDATA[– 300-319=-19]]></description>
			<content:encoded><![CDATA[<p style="text-align: center;"><iframe title="YouTube video player" class="youtube-player" type="text/html" width="425" height="344" src="http://www.youtube.com/embed/GuIRjtZJGmQ" frameborder="0" allowFullScreen></iframe></p>
<p style="text-align: left;">–</p>
<p>300-319=-19</p>
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		<slash:comments>2</slash:comments>
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		<item>
		<title>Turing gets an apology</title>
		<link>http://www.mailund.dk/index.php/2009/09/11/turing-gets-an-apology/</link>
		<comments>http://www.mailund.dk/index.php/2009/09/11/turing-gets-an-apology/#comments</comments>
		<pubDate>Fri, 11 Sep 2009 09:29:36 +0000</pubDate>
		<dc:creator>Thomas Mailund</dc:creator>
				<category><![CDATA[Uncategorized]]></category>

		<guid isPermaLink="false">http://www.mailund.dk/?p=1758</guid>
		<description><![CDATA[Gordon Brown apologizes for the treatment of Alan Turing: 2009 has been a year of deep reflection &#8211; a chance for Britain, as a nation, to commemorate the profound debts we owe to those who came before. A unique combination of anniversaries and events have stirred in us that sense of pride and gratitude which [...]]]></description>
			<content:encoded><![CDATA[<p>Gordon Brown <a href="http://www.number10.gov.uk/Page20571">apologizes for the treatment of Alan Turing</a>:</p>
<blockquote><p>2009 has been a year of deep reflection &#8211; a chance for Britain, as a nation, to commemorate the profound debts we owe to those who came before. A unique combination of anniversaries and events have stirred in us that sense of pride and gratitude which characterise the British experience. Earlier this year I stood with Presidents Sarkozy and Obama to honour the service and the sacrifice of the heroes who stormed the beaches of Normandy 65 years ago. And just last week, we marked the 70 years which have passed since the British government declared its willingness to take up arms against Fascism and declared the outbreak of World War Two. So I am both pleased and proud that, thanks to a coalition of computer scientists, historians and LGBT activists, we have this year a chance to mark and celebrate another contribution to Britain’s fight against the darkness of dictatorship; that of code-breaker Alan Turing.</p>
<p>Turing was a quite brilliant mathematician, most famous for his work on breaking the German Enigma codes. It is no exaggeration to say that, without his outstanding contribution, the history of World War Two could well have been very different. He truly was one of those individuals we can point to whose unique contribution helped to turn the tide of war. The debt of gratitude he is owed makes it all the more horrifying, therefore, that he was treated so inhumanely. In 1952, he was convicted of ‘gross indecency’ &#8211; in effect, tried for being gay. His sentence &#8211; and he was faced with the miserable choice of this or prison &#8211; was chemical castration by a series of injections of female hormones. He took his own life just two years later.</p></blockquote>
<p style="font-size: 1.05em;">&#8211;</p>
<p style="font-size: 1.05em;">254-279=-25</p>
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		<title>Pandemic</title>
		<link>http://www.mailund.dk/index.php/2009/06/11/pandemic/</link>
		<comments>http://www.mailund.dk/index.php/2009/06/11/pandemic/#comments</comments>
		<pubDate>Thu, 11 Jun 2009 16:50:05 +0000</pubDate>
		<dc:creator>Thomas Mailund</dc:creator>
				<category><![CDATA[Uncategorized]]></category>
		<category><![CDATA[influenza]]></category>
		<category><![CDATA[pandemic]]></category>

		<guid isPermaLink="false">http://www.mailund.dk/?p=1362</guid>
		<description><![CDATA[It&#8217;s official, the swine flu has been upgraded to pandemic. WHO chief Dr. Margaret Chan made the announcement Thursday after the U.N. agency held an emergency meeting with flu experts. Chan said she was moving the world to phase 6 — the agency&#8217;s highest alert level — which means a pandemic, or global epidemic, is [...]]]></description>
			<content:encoded><![CDATA[<p>It&#8217;s official, the <a href="http://www.google.com/hostednews/ap/article/ALeqM5jTkkEKE5LtPih_5Jcc-3MpD0gOYQD98OJ3M00">swine flu has been upgraded to pandemic</a>.</p>
<blockquote><p>WHO chief Dr. Margaret Chan made the announcement Thursday after the U.N. agency held an emergency meeting with flu experts. Chan said she was moving the world to phase 6 — the agency&#8217;s highest alert level — which means a pandemic, or global epidemic, is under way.<br />
&#8220;The world is moving into the early days of its first influenza pandemic in the 21st century,&#8221; Chan told reporters. &#8220;The (swine flu) virus is now unstoppable.&#8221;</p>
<p>&#8230;</p>
<p>The last pandemic — the Hong Kong flu of 1968 — killed about 1 million people. Ordinary flu kills about 250,000 to 500,000 people each year.</p></blockquote>
<p>&#8211;</p>
<p>162-166=-4</p>
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		<title>Repetitive strain injury</title>
		<link>http://www.mailund.dk/index.php/2009/06/07/repetitive-strain-injury/</link>
		<comments>http://www.mailund.dk/index.php/2009/06/07/repetitive-strain-injury/#comments</comments>
		<pubDate>Sun, 07 Jun 2009 10:38:15 +0000</pubDate>
		<dc:creator>Thomas Mailund</dc:creator>
				<category><![CDATA[Uncategorized]]></category>

		<guid isPermaLink="false">http://www.mailund.dk/?p=1316</guid>
		<description><![CDATA[I have suffered from repetitive strain injury for years.  Got it during my PhD studies where I did a lot of programming.  I have some exercises that helps, but other than that there is only resting from sitting at the computer that alleviates it.  Normally this works fine, and since I am not doing as [...]]]></description>
			<content:encoded><![CDATA[<p>I have suffered from <a href="http://en.wikipedia.org/wiki/Repetitive_strain_injury">repetitive strain injury</a> for years.  Got it during my PhD studies where I did a lot of programming.  I have some exercises that helps, but other than that there is only resting from sitting at the computer that alleviates it.  Normally this works fine, and since I am not doing as much late night programming as I used to do, it is not a major handicap.</p>
<p>The last two weeks, though, it has been pretty bad, so I have been off blogging.  I&#8217;m slowly recovering, so I guess it is time to slowly get back&#8230;</p>
<p>&#8211;</p>
<p>158-160=-2</p>
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		<title>A few more flu links</title>
		<link>http://www.mailund.dk/index.php/2009/04/29/a-few-more-flu-links/</link>
		<comments>http://www.mailund.dk/index.php/2009/04/29/a-few-more-flu-links/#comments</comments>
		<pubDate>Wed, 29 Apr 2009 05:49:56 +0000</pubDate>
		<dc:creator>Thomas Mailund</dc:creator>
				<category><![CDATA[Uncategorized]]></category>
		<category><![CDATA[flu]]></category>
		<category><![CDATA[pandemic]]></category>

		<guid isPermaLink="false">http://www.mailund.dk/?p=1222</guid>
		<description><![CDATA[Yes, people are still talking about the pig flu: How long does it take to sequence an influenza virus? (Aetiology) Flu news you can use (Neuron Culture) Nonoptimal virulence and avian influenza (Mike the Mad Biologist) World Health Organization raises pandemic alert level (Ars Technica) &#8211; 119-135=-16]]></description>
			<content:encoded><![CDATA[<p>Yes, people are still talking about the pig flu:</p>
<ul>
<li><a href="http://scienceblogs.com/aetiology/2009/04/how_long_does_it_take_to_seque.php">How long does it take to sequence an influenza virus?</a> (Aetiology)</li>
<li><a href="http://scienceblogs.com/neuronculture/2009/04/flu_news_you_can_use.php">Flu news you can use</a> (Neuron Culture)</li>
<li><a href="http://scienceblogs.com/mikethemadbiologist/2009/04/nonoptimal_virulence_and_avian_1.php">Nonoptimal virulence and avian influenza</a> (Mike the Mad Biologist)</li>
<li><a href="http://arstechnica.com/science/news/2009/04/world-health-organization-raises-pandemic-alert-level.ars">World Health Organization raises pandemic alert level</a> (Ars Technica)</li>
</ul>
<div>&#8211;</div>
<div>119-135=-16</div>
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		<title>How bad is the flu?</title>
		<link>http://www.mailund.dk/index.php/2009/04/27/how-bad-is-the-flu/</link>
		<comments>http://www.mailund.dk/index.php/2009/04/27/how-bad-is-the-flu/#comments</comments>
		<pubDate>Mon, 27 Apr 2009 13:18:14 +0000</pubDate>
		<dc:creator>Thomas Mailund</dc:creator>
				<category><![CDATA[Uncategorized]]></category>
		<category><![CDATA[flu]]></category>
		<category><![CDATA[pandemic]]></category>

		<guid isPermaLink="false">http://www.mailund.dk/?p=1202</guid>
		<description><![CDATA[It is all over the news these days, the swine flu from Mexico.  The US has declared an emergency and the first cases have appeard in Europe. How bad can it get?  Pretty bad, actually. We are better prepared than we were in 1918, but still, we also travel a lot more, so a pandemic [...]]]></description>
			<content:encoded><![CDATA[<p>It is all over the news these days, the <a href="http://topics.nytimes.com/top/reference/timestopics/subjects/i/influenza/swine_influenza/index.html?inline=nyt-classifier">swine flu</a> from Mexico.  The US has <a href="http://www.nytimes.com/2009/04/27/world/27flu.html?_r=2&amp;pagewanted=1">declared an emergency</a> and the first cases have <a href="http://www.timesonline.co.uk/tol/life_and_style/health/article6178618.ece">appeard in Europe</a>.</p>
<p>How bad can it get?  <a href="http://www.mailund.dk/index.php/2008/09/20/recreating-the-spanish-flu/">Pretty bad</a>, actually.</p>
<p>We are better prepared than we were in 1918, but still, we also travel a lot more, so a pandemic can spread <em>fast</em> if measures are not taken.</p>
<p>With the scare of the bird flu the last couple of years, one would hope that goverments are prepared, but of course it can also end up with a &#8220;boy that cried wolf&#8221; situation where people do not take the flu serious enough.</p>
<p>This might be a bad time to go to a busy airport, but I&#8217;m off to Heathrow now&#8230;</p>
<p>&#8211;</p>
<p>117-132=-15</p>
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