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	<title>Mailund on the Internet &#187; Fun</title>
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	<link>http://www.mailund.dk</link>
	<description>Computer science, bioinformatics, genetics, and everything in between</description>
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		<title>On the radio about orangutans</title>
		<link>http://www.mailund.dk/index.php/2011/03/10/on-the-radio-about-orangutans/</link>
		<comments>http://www.mailund.dk/index.php/2011/03/10/on-the-radio-about-orangutans/#comments</comments>
		<pubDate>Thu, 10 Mar 2011 16:15:33 +0000</pubDate>
		<dc:creator>Thomas Mailund</dc:creator>
				<category><![CDATA[Fun]]></category>
		<category><![CDATA[Research]]></category>

		<guid isPermaLink="false">http://www.mailund.dk/?p=2283</guid>
		<description><![CDATA[I&#8217;m working on a text book chapter and am a few weeks past the deadline, so I haven&#8217;t had time to blog lately. I have a few things I&#8217;d like to write about as soon as I am done with the chapter, but in the mean time here&#8217;s a podcast radio interview with me and [...]]]></description>
			<content:encoded><![CDATA[<p>I&#8217;m working on a text book chapter and am a few weeks past the deadline, so I haven&#8217;t had time to blog lately. I have a few things I&#8217;d like to write about as soon as I am done with the chapter, but in the mean time here&#8217;s a podcast radio interview with me and Mikkel Schierup (in Danish, though, sorry about that):</p>
<ul>
<li><a href="http://www.dr.dk/P1/Videnskabensverden/Udsendelser/2011/03/09103811.htm">Vi er alle lidt orangutaner</a></li>
</ul>
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		<slash:comments>2</slash:comments>
		</item>
		<item>
		<title>Symphony of science</title>
		<link>http://www.mailund.dk/index.php/2011/02/17/symphony-of-science/</link>
		<comments>http://www.mailund.dk/index.php/2011/02/17/symphony-of-science/#comments</comments>
		<pubDate>Thu, 17 Feb 2011 17:06:21 +0000</pubDate>
		<dc:creator>Thomas Mailund</dc:creator>
				<category><![CDATA[Fun]]></category>
		<category><![CDATA[video]]></category>

		<guid isPermaLink="false">http://www.mailund.dk/?p=2279</guid>
		<description><![CDATA[Featuring some of my greatest scientific idols, including Feynman and Sagan]]></description>
			<content:encoded><![CDATA[<p style="text-align: center;"><iframe title="YouTube video player" class="youtube-player" type="text/html" width="425" height="344" src="http://www.youtube.com/embed/XGK84Poeynk" frameborder="0" allowFullScreen></iframe></p>
<p>Featuring some of my greatest scientific idols, including Feynman and Sagan</p>
]]></content:encoded>
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		<item>
		<title>Oh no&#8230;</title>
		<link>http://www.mailund.dk/index.php/2011/02/17/oh-no/</link>
		<comments>http://www.mailund.dk/index.php/2011/02/17/oh-no/#comments</comments>
		<pubDate>Thu, 17 Feb 2011 16:02:00 +0000</pubDate>
		<dc:creator>Thomas Mailund</dc:creator>
				<category><![CDATA[Fun]]></category>
		<category><![CDATA[Rants]]></category>

		<guid isPermaLink="false">http://www.mailund.dk/?p=2277</guid>
		<description><![CDATA[Is blogs really science journalism? Maybe not, but the science news I get, I mainly get from great blogs, so even if it isn&#8217;t &#8220;proper&#8221; science journalism, I think I can say that it is where at least some scientists get their news. So it is a bit strange when a press officer doesn&#8217;t want [...]]]></description>
			<content:encoded><![CDATA[<p>Is blogs really science journalism? Maybe not, but the science news <em>I</em> get, I mainly get from great blogs, so even if it isn&#8217;t &#8220;proper&#8221; science journalism, I think I can say that it is where at least some scientists get their news.</p>
<p>So it is a bit strange when a press officer doesn&#8217;t want to talk to bloggers.</p>
<ul>
<li><a href="http://itwofs.com/beastoftraal/2011/02/16/would-you-tell-a-blogger-i-think-you-have-all-you-need-for-a-blog/">Would you tell a blogger, &#8220;I think this is all you need for a blog?&#8221;</a></li>
<li><a href="http://blogs.plos.org/speakeasyscience/2011/02/16/in-defense-of-science-blogs-yes-again/">In defence of science blogs (yet again)</a></li>
</ul>
<p>I know that I would absolutely <em>love</em> to have my research mentioned by Ed Young &#8212; I&#8217;ve been reading his<a href="http://blogs.discovermagazine.com/notrocketscience/"> Not Exactly Rocket Science</a> for years &#8212; so if a press officer at AU didn&#8217;t give him all the information he wanted, I&#8217;d be rather miffed.</p>
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		</item>
		<item>
		<title>Virgins</title>
		<link>http://www.mailund.dk/index.php/2011/02/06/virgins/</link>
		<comments>http://www.mailund.dk/index.php/2011/02/06/virgins/#comments</comments>
		<pubDate>Sun, 06 Feb 2011 06:56:12 +0000</pubDate>
		<dc:creator>Thomas Mailund</dc:creator>
				<category><![CDATA[Fun]]></category>

		<guid isPermaLink="false">http://www.mailund.dk/?p=2275</guid>
		<description><![CDATA[I&#8217;m watching the latest episode of Supernatural, titled Like a virgin, and something strikes me. In all other aspects of life, experience is a good thing. Howcome, when it comes to sex, not knowing what the hell you are doing is a virtue? Humans are crazy, it is time to give the bonobos a chance [...]]]></description>
			<content:encoded><![CDATA[<p>I&#8217;m watching the latest episode of <em>Supernatural</em>, titled <em>Like a virgin</em>, and something strikes me. In all other aspects of life, experience is a good thing. Howcome, when it comes to sex, not knowing what the hell you are doing is a <em>virtue?</em></p>
<p>Humans are crazy, it is time to give the bonobos a chance at the top of the food chain.</p>
<p>Completely beside the point, naming a website <em>Virgen scan</em> for virus gene scans is a bad idea. You won&#8217;t get the right kind of visitors. I know.</p>
<p>Loved this exchange in the episode of <em>Supernatural:</em></p>
<blockquote><p><em>Dean: So what can you tell me about dragons.</em></p>
<p><em>Bobby: They are not like the Loch Ness monster, dragons aren&#8217;t real!</em></p>
<p><em>Dean: Can you make a few calls?</em></p>
<p><em>Bobby: To where? Hogwarts?</em></p></blockquote>
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		<item>
		<title>Some places, not everywhere&#8230;</title>
		<link>http://www.mailund.dk/index.php/2011/01/26/some-places-not-everywhere/</link>
		<comments>http://www.mailund.dk/index.php/2011/01/26/some-places-not-everywhere/#comments</comments>
		<pubDate>Wed, 26 Jan 2011 18:40:00 +0000</pubDate>
		<dc:creator>Thomas Mailund</dc:creator>
				<category><![CDATA[Fun]]></category>
		<category><![CDATA[Research]]></category>
		<category><![CDATA[Work]]></category>

		<guid isPermaLink="false">http://www.mailund.dk/?p=2227</guid>
		<description><![CDATA[Just to avoid confusion, if you read this, it doesn&#8217;t imply this. We are suggesting that humans and orangutans are closer related than either to the chimpanzees in ~0.5% of the genome (and chimpanzees and orangutans are closer related than either to humans in another ~0.5%). That has to do with incomplete lineage sorting, and [...]]]></description>
			<content:encoded><![CDATA[<p>Just to avoid confusion, if you read <a href="http://www.sciencedaily.com/releases/2011/01/110126131548.htm">this</a>, it doesn&#8217;t imply <a href="http://www.sciencedaily.com/releases/2009/06/090618084304.htm">this</a>.</p>
<p>We are suggesting that humans and orangutans are closer related than either to the chimpanzees in ~0.5% of the genome (and chimpanzees and orangutans are closer related than either to humans in another ~0.5%). That has to do with <a href="http://www.mailund.dk/index.php/2009/02/12/on-gene-trees-and-species-trees/">incomplete lineage sorting</a>, and does not, in any way, imply that we as a species are closer related to orangutans than to chimpanzees.</p>
<p>Oh, and it doesn&#8217;t really mean that orangutan is our closest living relative in ~0.5% of the genome either. It is just closer than chimpanzee, but the gorilla could be closer related to us in those positions, so&#8230;</p>
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		</item>
		<item>
		<title>My first dashboard widget</title>
		<link>http://www.mailund.dk/index.php/2010/05/25/my-first-dashboard-widget/</link>
		<comments>http://www.mailund.dk/index.php/2010/05/25/my-first-dashboard-widget/#comments</comments>
		<pubDate>Tue, 25 May 2010 12:41:46 +0000</pubDate>
		<dc:creator>Thomas Mailund</dc:creator>
				<category><![CDATA[Fun]]></category>
		<category><![CDATA[Work]]></category>
		<category><![CDATA[mac]]></category>
		<category><![CDATA[programming]]></category>

		<guid isPermaLink="false">http://www.mailund.dk/?p=2185</guid>
		<description><![CDATA[These days I find myself converting between &#8220;coalescence units&#8221; (a time unit of 2Ne generations) and &#8220;substitution units&#8221; (time measured in expected number of substitutions) several times a day.   It is not really much of a problem to do, but my brain is simply not wired to do arithmetic in my head, so I [...]]]></description>
			<content:encoded><![CDATA[<p>These days I find myself converting between &#8220;coalescence units&#8221; (a time unit of 2Ne generations) and &#8220;substitution units&#8221; (time measured in expected number of substitutions) several times a day.   It is not really much of a problem to do, but my brain is simply not wired to do arithmetic in my head, so I usually fire up R or Python for this.</p>
<p>I am learning Objective-C and Cocoa these days, more for fun than anything else, but I figured that I could write a small unit conversion application to get some use out of it.  I mentioned this to Kasper, but he suggested that I write a dashboard widget instead.</p>
<p>I have never used Dashcode before, but I fired it up this morning before I headed for the office, to get a feeling for how it works, with the intention of writing a widget during the week.  It turns out it is extremely easy to work with, though, and within half an hour I had a complete conversion widget coded up.</p>
<p><a href="http://www.mailund.dk/wp-content/uploads/2010/05/Screen-shot-2010-05-25-at-3.38.20-PM.png"><img class="aligncenter size-medium wp-image-2186" title="CoalMM conversion widget" src="http://www.mailund.dk/wp-content/uploads/2010/05/Screen-shot-2010-05-25-at-3.38.20-PM-300x133.png" alt="" width="300" height="133" /></a>The only thing I don&#8217;t quite like about it yet is that when I do the conversions it doesn&#8217;t present the results in the text field in scientific notation, so I get stuff like 1000000 instead of 1e6 or 0.0001 instead of 1e-4, which makes the conversions somewhat harder to read.</p>
<p>I&#8217;m sure there is a way to format the numbers, but my Javascript-fu is not up to it.  This widget is the first Javascript I have ever written.</p>
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		</item>
		<item>
		<title>Motivation</title>
		<link>http://www.mailund.dk/index.php/2010/05/19/motivation/</link>
		<comments>http://www.mailund.dk/index.php/2010/05/19/motivation/#comments</comments>
		<pubDate>Wed, 19 May 2010 07:52:55 +0000</pubDate>
		<dc:creator>Thomas Mailund</dc:creator>
				<category><![CDATA[Fun]]></category>
		<category><![CDATA[video]]></category>

		<guid isPermaLink="false">http://www.mailund.dk/?p=2181</guid>
		<description><![CDATA[Hat tip Amir.]]></description>
			<content:encoded><![CDATA[<p style="text-align: center;"><iframe title="YouTube video player" class="youtube-player" type="text/html" width="425" height="344" src="http://www.youtube.com/embed/u6XAPnuFjJc" frameborder="0" allowFullScreen></iframe></p>
<p style="text-align: left;">Hat tip <a href="http://amix.dk/blog/post/19506">Amir</a>.</p>
]]></content:encoded>
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		<item>
		<title>Boat race</title>
		<link>http://www.mailund.dk/index.php/2010/04/29/boat-race/</link>
		<comments>http://www.mailund.dk/index.php/2010/04/29/boat-race/#comments</comments>
		<pubDate>Thu, 29 Apr 2010 04:30:21 +0000</pubDate>
		<dc:creator>Thomas Mailund</dc:creator>
				<category><![CDATA[Fun]]></category>

		<guid isPermaLink="false">http://www.mailund.dk/?p=2131</guid>
		<description><![CDATA[Today, Aarhus University holds its traditional boat race at our university park. This is a rowing competition where student groups from all over the university competes.  It isn&#8217;t quite like the traditional Oxford/Cambridge boat race.  For one thing, the race is across a lake that is only a few meters wide (but you have to [...]]]></description>
			<content:encoded><![CDATA[<p>Today, Aarhus University holds its <a href="http://www.kapsejladsen.dk/">traditional boat race</a> at our university park.</p>
<p>This is a rowing competition where student groups from all over the university competes.  It isn&#8217;t <em>quite</em> like the traditional Oxford/Cambridge boat race.  For one thing, the race is across a lake that is only a few meters wide (but you have to cross it more than once). Another difference is that only inflatable boats are allowed in the race.</p>
<p style="text-align: left;"><a href="http://www.mailund.dk/wp-content/uploads/2010/04/rowing.jpg"><img class="aligncenter size-medium wp-image-2132" style="border: 1px solid black;" title="Rowing" src="http://www.mailund.dk/wp-content/uploads/2010/04/rowing-300x200.jpg" alt="" width="300" height="200" /></a>Well, with one exception.  The group that I belong to (although no longer a student I am still a proud member), TAAGEKAMMERET, can compete in any home made boat we want as long as we promise not to win.  So far we have kept that promise and I am sure we will keep up this proud tradition.</p>
<p style="text-align: left;">Another thing that differs a bit is that it is not just a rowing competition, but also a drinking competition.</p>
<p style="text-align: left;"><a href="http://www.mailund.dk/wp-content/uploads/2010/04/drinking.jpg"><img class="aligncenter size-medium wp-image-2133" style="border: 1px solid black;" title="Drinking" src="http://www.mailund.dk/wp-content/uploads/2010/04/drinking-300x200.jpg" alt="" width="300" height="200" /></a></p>
<p style="text-align: left;">Each time you reach the other shore, you have to drink a beer before you can get back in the boat for the next lap.</p>
<p style="text-align: left;">Beer sale starts at noon, the race is two to five, and after that it breaks into different parties at the various departments around the university.</p>
<p style="text-align: left;">Tomorrow is a holiday here, which is probably good since those parties tend to last all night.</p>
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		<item>
		<title>Hubble tour</title>
		<link>http://www.mailund.dk/index.php/2010/04/27/hubble-tour/</link>
		<comments>http://www.mailund.dk/index.php/2010/04/27/hubble-tour/#comments</comments>
		<pubDate>Tue, 27 Apr 2010 10:50:12 +0000</pubDate>
		<dc:creator>Thomas Mailund</dc:creator>
				<category><![CDATA[Fun]]></category>
		<category><![CDATA[Space]]></category>
		<category><![CDATA[video]]></category>

		<guid isPermaLink="false">http://www.mailund.dk/?p=2112</guid>
		<description><![CDATA[Apropos Hubble Space Telescope&#8217;s birthday, here&#8217;s a great video from Google:]]></description>
			<content:encoded><![CDATA[<p>Apropos <a href="http://www.mailund.dk/index.php/2010/04/24/happy-birthday-hubble/">Hubble Space Telescope&#8217;s birthday</a>, here&#8217;s a great video from <a href="http://googleblog.blogspot.com/2010/04/helping-you-find-your-way-through-final.html">Google</a>:</p>
<p style="text-align: center;"><iframe title="YouTube video player" class="youtube-player" type="text/html" width="425" height="344" src="http://www.youtube.com/embed/c2JOM3Iw8NI" frameborder="0" allowFullScreen></iframe></p>
]]></content:encoded>
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		<item>
		<title>A Dismal Guide to Concurrency</title>
		<link>http://www.mailund.dk/index.php/2010/04/26/a-dismal-guide-to-concurrency/</link>
		<comments>http://www.mailund.dk/index.php/2010/04/26/a-dismal-guide-to-concurrency/#comments</comments>
		<pubDate>Mon, 26 Apr 2010 15:36:41 +0000</pubDate>
		<dc:creator>Thomas Mailund</dc:creator>
				<category><![CDATA[Fun]]></category>
		<category><![CDATA[Work]]></category>

		<guid isPermaLink="false">http://www.mailund.dk/?p=2097</guid>
		<description><![CDATA[Carlos Bueno has a very nice discussion of the problems (and potential solutions) to developing concurrent systems here. Worth a read.]]></description>
			<content:encoded><![CDATA[<p>Carlos Bueno has a <em>very</em> nice discussion of the problems (and potential solutions) to developing concurrent systems <a href="http://www.facebook.com/notes/facebook-engineering/a-dismal-guide-to-concurrency/379717628919">here</a>.</p>
<p>Worth a read.</p>
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